CANCELLED! Introduction to scientific computing

Contribution List

1. Welcome + Introduction to computer science : historical perspective, computer structure, operating systems & languages

Prof. Christophe Phillips (GIGA in silico medicine & CRC in vivo imaging)

21/11/2023, 09:30

2. Data representation & storage: bits/bytes, data format, signal discretization, compression

Dr Mohamed Bahri

21/11/2023, 10:00

18. GIGA-ULiege Mass storage

David Stern

21/11/2023, 11:30

4. Python basics 1: Introduction + tools

Olivier Renson (ULiege)

21/11/2023, 13:30

https://gitlab.uliege.be/giga-bioinfo/trainings/python_course/-/tree/master/1-Basics

3. (ULiège IT resources by the SeGI/UDI’s) TBC.

Mr Yves Wesche

21/11/2023, 16:30

19. Research Data Management and Reproducibility: good habits for good research

Dr Judith Biernaux (ARD ULiege)

28/11/2023, 09:00

11. Working with personal data ? Think GDPR!

Mr Pierre-François Pirlet

28/11/2023, 10:00

12. Data processing in genomics, from the sequencers to the results: data management, pipelines and containers, reproductibility.

Dr Arnaud Lavergne

28/11/2023, 11:30

7. Python basics 2: Operators, variables, conditions and loops

Olivier Renson (ULiege)

28/11/2023, 13:30

https://gitlab.uliege.be/giga-bioinfo/trainings/python_course/-/tree/master/1-Basics

5. Introduction to algorithmic thinking: Different types of algorithms, computer logic.

Dr Mohamed Bahri

05/12/2023, 09:00

6. Good practices in scientific computing: Code modularity, validation, optimization, documentation

Prof. Christophe Phillips (GIGA in silico medicine & CRC in vivo imaging)

05/12/2023, 10:00

9. Working with High Performance Computing Clusters & parallel processing.

Dr Alice Mayer

05/12/2023, 11:30

10. Python basics 3: Data structures

Olivier Renson (ULiege)

05/12/2023, 13:30

https://gitlab.uliege.be/giga-bioinfo/trainings/python_course/-/tree/master/1-Basics

8. Code versioning & Git, an introduction.

Prof. Christophe Phillips (GIGA in silico medicine & CRC in vivo imaging)

12/12/2023, 09:00

13. GitHub/Gitlab account hands-on check and explanations (1/2)

Dr Grégory Hammad (GIGA-CRC in vivo imaging)

12/12/2023, 09:45

24. GitHub/Gitlab account hands-on check and explanations (2/2)

Dr Grégory Hammad (GIGA-CRC in vivo imaging)

12/12/2023, 11:15

14. Python basics 4: Functions and Errors Catching

Olivier Renson (ULiege)

12/12/2023, 13:30

https://gitlab.uliege.be/giga-bioinfo/trainings/python_course/-/tree/master/1-Basics

21. Introduction to AI

Prof. Christophe Phillips (GIGA in silico medicine & CRC in vivo imaging)

19/12/2023, 09:00

22. AI demo

Alexandre Hego

19/12/2023, 10:00

15. Access to and use of the mass storage

Dr Alice Mayer

19/12/2023, 11:30

23. Python basics 5: File I/O, os interaction and exercises

Olivier Renson (ULiege)

19/12/2023, 13:30

https://gitlab.uliege.be/giga-bioinfo/trainings/python_course/-/tree/master/1-Basics

20. Closing comments + Q&A

Dr Alice Mayer, Prof. Christophe Phillips (GIGA in silico medicine & CRC in vivo imaging)

19/12/2023, 16:30

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