Introduction to scientific computing
from
Monday, 3 October 2022 (09:00)
to
Monday, 24 October 2022 (18:30)
Monday, 3 October 2022
Tuesday, 4 October 2022
Wednesday, 5 October 2022
Thursday, 6 October 2022
09:30
Welcome + Introduction to computer science : historical perspective, computer structure, operating systems & languages
-
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Welcome + Introduction to computer science : historical perspective, computer structure, operating systems & languages
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
09:30 - 10:00
Room: Guysen
10:00
Data representation & storage: bits/bytes, data format, signal discretization, compression
-
Mohamed Bahri
Data representation & storage: bits/bytes, data format, signal discretization, compression
Mohamed Bahri
10:00 - 11:00
Room: Guysen
11:00
Coffee break
Coffee break
11:00 - 11:30
Room: Guysen
11:30
ULiège IT resources by the SeGI/UDI’s
-
Yves Wesche
ULiège IT resources by the SeGI/UDI’s
Yves Wesche
11:30 - 12:00
Room: Guysen
12:00
GIGA-ULiege Mass storage
-
David Stern
GIGA-ULiege Mass storage
David Stern
12:00 - 12:30
Room: Guysen
12:30
Lunch break
Lunch break
12:30 - 13:30
Room: Guysen
13:30
Access to and use of the mass storage
-
Alice Mayer
Access to and use of the mass storage
Alice Mayer
13:30 - 14:30
Room: Guysen
14:30
Coffee break
Coffee break
14:30 - 15:00
Room: Guysen
15:00
Matlab & Octave practical
-
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Matlab & Octave practical
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
15:00 - 17:00
Room: Guysen
See the 'minutes' for the program
Friday, 7 October 2022
Saturday, 8 October 2022
Sunday, 9 October 2022
Monday, 10 October 2022
09:30
Introduction to algorithmic thinking: Different types of algorithms, computer logic.
-
Mohamed Bahri
Introduction to algorithmic thinking: Different types of algorithms, computer logic.
Mohamed Bahri
09:30 - 10:30
Room: Guysen
10:30
Coffee break
Coffee break
10:30 - 11:00
Room: Guysen
11:00
Code versioning & Git, an introduction.
-
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Code versioning & Git, an introduction.
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
11:00 - 12:00
Room: Guysen
12:00
Lunch break
Lunch break
12:00 - 13:00
Room: Guysen
13:00
GitHub/Gitlab account hands-on check and explanations
-
Grégory Hammad
(GIGA-CRC in vivo imaging)
GitHub/Gitlab account hands-on check and explanations
Grégory Hammad
(GIGA-CRC in vivo imaging)
13:00 - 15:00
Room: Guysen
15:00
Coffee break
Coffee break
15:00 - 15:30
Room: Guysen
15:30
Matlab & Octave practical
-
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Mohamed Bahri
Matlab & Octave practical
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Mohamed Bahri
15:30 - 17:30
Room: Guysen
See the 'minutes' for the program
Tuesday, 11 October 2022
Wednesday, 12 October 2022
Thursday, 13 October 2022
Friday, 14 October 2022
Saturday, 15 October 2022
Sunday, 16 October 2022
Monday, 17 October 2022
09:30
Good practices in scientific computing: Code modularity, validation, optimization, documentation
-
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Good practices in scientific computing: Code modularity, validation, optimization, documentation
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
09:30 - 10:30
Room: Guysen
10:30
Coffee break
Coffee break
10:30 - 11:00
Room: Guysen
11:00
Working with High Performance Computing Clusters & parallel processing (including hands-on on GIGA cluster).
-
Alice Mayer
Working with High Performance Computing Clusters & parallel processing (including hands-on on GIGA cluster).
Alice Mayer
11:00 - 13:00
Room: Guysen
13:00
Lunch break
Lunch break
13:00 - 14:00
Room: Guysen
14:00
Research Data Management and Reproducibility: good habits for good research
-
Judith Biernaux
(ARD ULiege)
Research Data Management and Reproducibility: good habits for good research
Judith Biernaux
(ARD ULiege)
14:00 - 15:00
Room: Guysen
15:00
Coffee break
Coffee break
15:00 - 15:30
Room: Guysen
15:30
Matlab & Octave practical
-
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Matlab & Octave practical
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
15:30 - 17:30
Room: Guysen
See the 'minutes' for the program
Tuesday, 18 October 2022
Wednesday, 19 October 2022
Thursday, 20 October 2022
Friday, 21 October 2022
Saturday, 22 October 2022
Sunday, 23 October 2022
Monday, 24 October 2022
09:30
Working with personal data ? Think GDPR!
-
Pierre-François Pirlet
Working with personal data ? Think GDPR!
Pierre-François Pirlet
09:30 - 10:30
Room: Guysen
10:30
Coffee break
Coffee break
10:30 - 11:00
Room: Guysen
11:00
Data processing in genomics, from the sequencers to the results: data management, pipelines and containers, reproductibility.
-
Arnaud Lavergne
Data processing in genomics, from the sequencers to the results: data management, pipelines and containers, reproductibility.
Arnaud Lavergne
11:00 - 12:15
Room: Guysen
12:15
Lunch break
Lunch break
12:15 - 13:15
Room: Guysen
13:15
Matlab & Octave practical
-
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Matlab & Octave practical
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
13:15 - 15:15
Room: Guysen
15:15
Coffee break
Coffee break
15:15 - 15:45
Room: Guysen
15:45
Closing comments + Q&A
-
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
Closing comments + Q&A
Mohamed Bahri
Christophe Phillips
(GIGA in silico medicine & CRC in vivo imaging)
15:45 - 16:00
Room: Guysen